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Synthidbio

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Google DeepMind unveils SynthIDBio watermark for AI-designed proteins

Google DeepMind researchers in London have built a watermarking system, described in Nature, that embeds a hidden statistical signal into both the amino-acid sequence and 3D structure of AI-designed proteins. The tag, called SynthIDBio, is meant to mark proteins as machine-generated without impairing their biological function, allowing them to be identified later in databases.

Google DeepMind adapts SynthID watermarking to AI-designed protein sequences

Researchers have extended Google's SynthID-text watermarking system to ProteinMPNN, a widely used protein sequence design model, creating a method called SynthIDBio-sequence. The approach embeds a detectable signal during the autoregressive sampling of amino acids, using a random seed, scoring function and tournament sampling algorithm similar to the text version. Because protein design typically uses low-temperature sampling that limits randomness, the team also developed a distortionary variant with an added filter to preserve detectability.